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fix bug in channel registration not respecting changed parameteres

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Hannes Kuchelmeister
2021-10-17 18:26:08 +02:00
parent 7b4c13c133
commit 1358c98171
2 changed files with 130 additions and 128 deletions
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253
notebook/tile_demo_test.ipynb
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3
situr/registration/channel_registration.py
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@@ -45,7 +45,8 @@ class ChannelRegistration(Registration):
reference_channel (int, optional): the reference channel that all channels are reference_channel (int, optional): the reference channel that all channels are
registered against. Defaults to 0. registered against. Defaults to 0.
""" """
registration = SituImageChannelRegistration()
registration = SituImageChannelRegistration(self.registration_function, peak_finder=self.peak_finder)
# For each channel (except nucleus) compute transform compared to reference_channel # For each channel (except nucleus) compute transform compared to reference_channel
# Add Channel transformation to Channel # Add Channel transformation to Channel
for round in range(tile.get_round_count()): for round in range(tile.get_round_count()):